Pkg_resources.ContextualVersionConflict: (matplotlib 1.5.1 (/usr/lib/python2.7/dist-packages), Requirement.parse('matplotlib>=2.0. Raise VersionConflict(dist, req).with_context(dependent_req) A reliable constitutive model is a prerequisite to simulate a new complex forming technique, which is represented by the near-net shape forging process of aluminum wheels in this study. It is selected and loaded upon startup of CPA. This file can be stored anywhere on your computer. Data are mean standard error of the mean of n 3 independent. CellProfiler Analyst 2.0, completely rewritten in Python, builds on these features and adds enhanced supervised. The properties file is a plain text file that contains the configuration information necessary for CPA to access your data and images. A subsequent reinforcement classification, by CellProfiler Analyst, improves the. CellProfiler Analyst allows the exploration and visualization of image-based data, together with the classification of complex biological phenotypes, via an interactive user interface designed for biologists and data scientists.
#CELLPROFILER ANALYST ERROR 13 HOW TO#
Return cls._build_from_requirements(_requires_)įile "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 593, in _build_from_requirementsįile "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 786, in resolve A brief introduction to CellProfiler-Analyst- learn how to explore your data, make graphs, and even sort objects into classes using machine learningCellPro. Setting up the properties file CellProfiler Analyst 2.2.1 documentation. Cell profiler seems to be running using python2.7, not python3.6 which is also set up on this machine, so this could be the source of the problem?Įrror message in full: Traceback (most recent call last):įile "/usr/local/bin/cellprofiler", line 6, in įrom pkg_resources import load_entry_pointįile "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 3112, in "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 3096, in _call_asideįile "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 3125, in _initialize_master_working_setįile "/usr/local/lib/python2.7/dist-packages/pkg_resources/_init_.py", line 580, in _build_master However when I attempt to run cellprofiler from terminal, i encounter the following error code, which seems to be telling me there is a version conflict of matplotlib.
Im trying to run the bioimaging analysis package 'cell profiler' on Ubuntu 16.04, following the source installation instructions provided by the developers: To overcome the limitation of on-site test data, researchers generally adopt three-dimensional numerical simulation methods to conduct the back analysis of the in situ stress field in the engineering field 10,11,12,13.
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